What does microbiome do?

Through this collection of literature Microbiome hopes to integrate researchers with common scientific objectives across a broad cross-section of sub-disciplines within microbial ecology. Microbiome works closely with its sister journals Environmental Microbiome and Animal Microbiome, and with BMC Microbiology.

Does a microbiome video increase citations?

Articles on Microbiome with an associated video saw an increase of 168% in article views, 143% increase in citations, and 161% increase in Altmetric scores compared to articles without videos. If you’d like to learn more, check out Video Bytes here.

🏅 Top Microbiome Profiling

MICK: Integrating Microbiome Analysis into Clinical Practice.

· MICK provides the most complete microbiome profiling, offering a thorough analysis of microbial composition. Insight Extraction. The platform extracts relevant insights, including health markers, and dysbiosis indexes, enhancing the depth of understanding for clinicians. ... Top 10 digital companies in Catalonia. Team. Tough challenges require ...

Feb 7, 2024

Microbiome | Nature

· The microbiota of centenarians (aged 100 years and older) comprise gut microorganisms that are capable of generating unique secondary bile acids, including isoallolithocholic acid, a bile acid ...

Feb 7, 2024

Gut microbiome dynamics and Enterobacterales infection in liver ...

· Gut microbiome profiling. Microbial DNA was extracted from rectal/fecal samples using the repeated bead-beating protocol. Yu Z. ... Top, Average number of antimicrobial resistance (AMR) genes per patient for each antibiotic inactivation-mediated resistance class in each patient group (CRE_I, with carbapenem-resistant Enterobacterales (CRE ...

3 days ago

Advances in metaproteomic profiling of molecular microbiology and ...

· A "top-down" analysis of the intact proteins or a "bottom-up" analysis of the peptides produced by the trypsin digestion of proteins can be used to study the proteome. ... Significance of metaproteomics in molecular community profiling. ... the rhizosphere metaproteome analysis enables us to evaluate the rhizosphere microbiome's responses to ...

1 day ago

New Technique to Sample the Subgingival Microbiome - BioTechniques

· This new method was developed to fill a gap in current subgingival microbiome research. Traditional sampling techniques for the subgingival microbiome are invasive and cannot be collected at home. This hinders research into the subgingival microbiome by limiting the ability to perform large-scale epidemiological studies.

1 day ago

Articles | Microbiome - BioMed Central

· Julius Eyiuche Nweze, Vladimír Šustr, Andreas Brune and Roey Angel Microbiome 2024 12 :16 Research Published on: 29 January 2024 Full Text PDF Autotrophic biofilms sustained by deeply sourced groundwater host diverse bacteria implicated in sulfur and hydrogen metabolism

2 days ago

Full-length 16S rDNA sequencing based on Oxford Nanopore ... - Nature

· Figure 3c shows the top 20 species identified in the pharyngeal microbiome. The most abundant species was Neisseria meningitidis, contributing 10.4 ± 8.8% of the community.

4 days ago

Microbial-derived imidazole propionate links the heart failure ...

· Taxonomic profiling of the filtered sequence data was performed using ... and taxa were ranked based on how often they were selected among the top 20 most predictive taxa within each resampled dataset. ... Broch K, Hov JR. The gut microbiome in coronary artery disease and heart failure: Current knowledge and future directions. EBioMedicine ...

6 days ago

Best Practices For Analysing Microbiomes

New Technique to Sample the Subgingival Microbiome - BioTechniques

· Here, Toma provides an insight into his recently published article in BioTechniques, providing an insight into the impact of his newly developed method and key tips for best practices when using it. Please provide a short summary of your paper “A novel method for sampling subgingival microbiome – a comparative metatranscriptomic study” published in BioTechniques.

1 day ago

Microbiome | Nature

· The analysis of DNA sequences sheds light on microbial biology, but it is difficult to assess the function of genes that have little or no similarity to characterized genes. Here, scientists...

Feb 7, 2024

Home page | Microbiome

· Microbiome: The scope of the journal encompasses studies of microbiomes colonizing humans, animals, plants or the environment, both built and natural or manipulated, as in agriculture.Studies on the development and application of meta-omics approaches or novel bioinformatics tools, on community/host interaction with emphasis on structure-function relationship that would lead to substantial ...

4 days ago

Articles | Microbiome - BioMed Central

· Full Text PDF Metagenomics reveals the temporal dynamics of the rumen resistome and microbiome in goat kids The gut microbiome of domestic animals carries antibiotic resistance genes (ARGs) which can be transmitted to the environment and humans, resulting in challenges of antibiotic resistance. Although it has been ...

2 days ago

integrated method for targeted Oxford Nanopore ... - Oxford Academic

· Metagenomics of clinical samples and microbiomes have enabled a better understanding of the role of pathogens. However, the use of metagenomics in clinical practice has been limited due to non-standardized methods of sample processing and need of expertise for the bioinformatic analysis of next generation sequencing (NGS) data.

2 days ago

The prevalence of controls in phyllosphere microbiome research: a ...

· Introduction. Microbiomes are becoming increasingly studied in many biological disciplines. These microbial communities are seemingly everywhere in the literature, and although they are of particular medical interest today, some of the first microbiomes defined were those found on plants (Whipps et al., 1988).Today, current literature shows us that plant microbiomes can be just as complex as ...

5 days ago

Dynamics of bacterial recombination in the human gut microbiome

· Partially recombined genomes underlie the broad range of genetic diversity in many species of gut bacteria. To quantify the dynamics of homologous recombination across different timescales, we analyzed shotgun metagenomic data from a collection of healthy human gut microbiomes that we collated in a previous study [].This data set comprises 932 fecal samples from 693 subjects from North America ...

6 days ago

Microbiome - National Human Genome Research Institute

· … The microbiome is the community of microorganisms (such as fungi, bacteria and viruses) that exists in a particular environment. In humans, the term is often used to describe the microorganisms that live in or on a particular part of the body, such as the skin or gastrointestinal tract.

6 days ago

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